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In the Shadow of Medicine: The Glaring Absence of Occurrence Records of Human-Hosted Biodiversity
To gain an overview of the main environments colonized by microbial species (including bacterial, archaeal, and eukaryotic microbial species), researchers have used the three-level environment classification system associated with 23,828 samples collected during the Earth Microbiome Project as a proxy [2].
Online J Public Health Inform 2024;16:e60140
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The microbiome plays a central role in health and disease, contributing to the development and regulation of metabolic and immune functions [47,48]. From birth, the microbiome changes in response to host and environmental factors [49]. Disruptions in the early life microbiome can negatively impact a wide range of health outcomes [50,51].
JMIR Res Protoc 2024;13:e63562
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The early stages of gut microbiome development are marked by unique temporal microbe uptake, colonization, and selection, all of which have variable functional characteristics throughout time. This carefully managed microbial sequence begins at birth and continues until the microbiome acquires an adult-like makeup and function around 3 years of age [1].
JMIR Res Protoc 2024;13:e56772
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Although the associations between sleep and gut microbiome community changes have been established, it is unknown if altered sleep influences the microbiome, the microbiome influences sleep, or sleep and the microbiome mutually modulate each other and are altered by a disruption in either system.
JMIR Res Protoc 2022;11(6):e38605
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It is important to note that all the participants were in the overweight range, which has been associated with a lower microbiome diversity [41] and therefore potentially poses an increased risk of bloating. Constipation is one of the most common digestive symptoms with a global prevalence of 14% [42]. Common causes include consuming a diet low in fiber, medication (such as iron supplements), a lack of physical activity, and dysbiosis of the gut microbiota [43].
JMIR Form Res 2022;6(5):e36339
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Misinformation About the Human Gut Microbiome in YouTube Videos: Cross-sectional Study
Despite the paucity of high-grade evidence on the mechanisms through which the microbiome may be reconfigured to optimize human physiology, there has been a sharp rise in videos that promote lifestyle-based strategies which purport to modify the gut microbiome for health and well-being benefits [14,15].
JMIR Form Res 2022;6(5):e37546
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Recent research has been exploring the connections between mood and anxiety disorders and the gut microbiome. As such, the gut-brain axis (GBA), which consists of bidirectional signaling between the gastrointestinal (GI) tract and the brain [10], has become a novel target for treatment of mood and anxiety symptoms. Studies suggest that this improvement of depressive and anxiety symptoms and severity may be related to the recolonization of the GI tract with healthy bacteria [11].
Interact J Med Res 2022;11(1):e32234
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This fact, together with an increasing awareness of the importance of a “healthy gut” and the gastrointestinal microbiome, has led to growing research, financial investment, and consumer interest in probiotic treatments that may provide benefits to patients with IBS [17,18].
J Med Internet Res 2021;23(12):e30291
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Multiscale Biology of Cardiovascular Risk in Psoriasis: Protocol for a Case-Control Study
The skin microbiome is analyzed by shotgun metagenomics with untargeted sequencing of all microbial genomes [19].
Two 4-mm skin punch biopsies are taken under local anesthesia, including one from active psoriatic skin and one from clinically healthy skin neighboring the psoriatic biopsy area with a minimum distance of 2 cm from the psoriasis biopsy. The biopsy locations have the same priority for body sites as the skin swabs.
JMIR Res Protoc 2021;10(9):e28669
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